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  5. Als_g38067

Als_g38067


Description : STAR-type post-transcriptionally regulatory factor & original description: none


Gene families : OG0001245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001245_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g38067
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Als_g21994 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Als_g40051 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Aop_g02529 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g23208 No alias STAR-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01014762001 No alias KH domain-containing protein At5g56140 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g49080.1 LOC_Os02g49080 KH domain-containing protein At5g56140 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g60110.1 LOC_Os03g60110 KH domain-containing protein SPIN1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Pir_g37605 No alias STAR-type post-transcriptionally regulatory factor &... 0.02 OrthoFinder output from all 47 species
Zm00001e033145_P002 Zm00001e033145 KH domain-containing protein SPIN1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 154 204
IPR032377 STAR_dimer 45 77
No external refs found!