Aliases : PBF1
Description : beta-type-6 component *(PBF) of 26S proteasome & original description: none
Gene families : OG0004409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004409_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Mp1g12450.1 | PBF1 | component beta type-6 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g084920.3.1 | PBF1, Solyc02g084920 | component beta type-6 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010121_P001 | PBF1, Zm00001e010121 | component beta type-6 of 26S proteasome | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
BP | GO:0015936 | coenzyme A metabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001353 | Proteasome_sua/b | 2 | 197 |
No external refs found! |