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  5. Gb_22655

Gb_22655


Description : Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana (sp|q9zuw3|pp172_arath : 672.0)


Gene families : OG_01_0031207 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0018337 (LandPlants) Phylogenetic Tree(s): OG_02_0018337_tree ,
OG_03_0027582 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22655
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Gb_22658 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 LandPlants
MA_252238g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 LandPlants
MA_252238g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 502 526
IPR002885 Pentatricopeptide_repeat 703 728
IPR002885 Pentatricopeptide_repeat 300 326
IPR002885 Pentatricopeptide_repeat 401 425
IPR002885 Pentatricopeptide_repeat 768 797
IPR002885 Pentatricopeptide_repeat 191 221
IPR002885 Pentatricopeptide_repeat 328 373
IPR002885 Pentatricopeptide_repeat 224 273
IPR002885 Pentatricopeptide_repeat 527 574
IPR002885 Pentatricopeptide_repeat 628 675
IPR002885 Pentatricopeptide_repeat 427 470
IPR032867 DYW_dom 802 925
No external refs found!