1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g13861

Pnu_g13861 (ATMED14, MED14, SWP)


Aliases : ATMED14, MED14, SWP

Description : component *(MED14) of tail module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0003954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13861
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT3G04740 ATMED14, MED14, SWP RNA polymerase II transcription mediators 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049135 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Ceric.06G040100.1 ATMED14, MED14,... component *(MED14) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Cre03.g190550 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01021781001 ATMED14, MED14, SWP RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
LOC_Os09g10960.1 ATMED14, MED14,... component MED14 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Len_g30748 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
MA_10435964g0030 ATMED14, MED14, SWP component MED14 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Msp_g13510 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Smo90823 ATMED14, MED14, SWP RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Solyc01g097320.3.1 ATMED14, MED14,... component MED14 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA Interproscan
BP GO:0006357 regulation of transcription by RNA polymerase II IEA Interproscan
CC GO:0016592 mediator complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013947 Mediator_Med14 13 200
No external refs found!