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  5. Als_g34695

Als_g34695


Description : component *(eL6) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g34695
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00218700 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G18540 No alias Ribosomal protein L6 family protein 0.03 OrthoFinder output from all 47 species
AT1G74050 No alias Ribosomal protein L6 family protein 0.03 OrthoFinder output from all 47 species
AT1G74060 No alias Ribosomal protein L6 family protein 0.03 OrthoFinder output from all 47 species
Als_g24717 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g23018 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g30780 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.29G021300.1 Ceric.29G021300 component *(eL6) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cre01.g011000 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01033532001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Mp3g11670.1 No alias component RPL6 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Msp_g07934 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g28283 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g33761 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc11g012110.2.1 Solyc11g012110 component RPL6 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g16223 No alias component *(eL6) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000915 60S_ribosomal_L6E 96 204
No external refs found!