1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g34081

Als_g34081 (AT-GTL1, GTL1, AT-GTL2)


Aliases : AT-GTL1, GTL1, AT-GTL2

Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g34081

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Adi_g085245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13661 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_37561 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
LOC_Os02g01380.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
MA_331768g0020 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Msp_g06995 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19131 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 577 665
IPR044822 Myb_DNA-bind_4 229 315
No external refs found!