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Pnu_g13656


Description : tyrosyl-DNA phosphodiesterase *(TDP2) & original description: none


Gene families : OG0003651 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13656
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00211070 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Len_g12218 No alias tyrosyl-DNA phosphodiesterase *(TDP2) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0502.g027443 No alias tyrosyl-DNA phosphodiesterase *(TDP2) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0732.g027661 No alias tyrosyl-DNA phosphodiesterase *(TDP2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g50630 No alias tyrosyl-DNA phosphodiesterase *(TDP2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 50 77
IPR005135 Endo/exonuclease/phosphatase 210 366
No external refs found!