Pnu_g13623

Description : subunit delta *(CCT4) of CCT chaperonin folding complex & original description: none

Gene families : OG0005270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005270_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g13623
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
Ala_g09928	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Aob_g14670	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Cba_g04618	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Dac_g14277	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.02	OrthoFinder output from all 47 species
Dcu_g03883	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.05	OrthoFinder output from all 47 species
MA_18588g0010	No alias	CCT4 subunit delta of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
Msp_g07185	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.03	OrthoFinder output from all 47 species
Solyc03g118910.1.1	Solyc03g118910	CCT4 subunit delta of CCT chaperonin folding complex	0.03	OrthoFinder output from all 47 species
Spa_g12742	No alias	subunit delta *(CCT4) of CCT chaperonin folding complex...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	36	530

External Links

No external refs found!