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  5. Als_g32921

Als_g32921 (ATX1, SDG27)


Aliases : ATX1, SDG27

Description : class-III histone methyltransferase *(Trx) & original description: none


Gene families : OG0004303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g32921

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00115800 SDG30, ATX2,... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
AT1G05830 SDG30, ATX2 trithorax-like protein 2 0.06 OrthoFinder output from all 47 species
Aev_g04886 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Aev_g32400 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ala_g02683 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Aob_g29671 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G024500.1 SDG30, ATX2,... class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Dde_g51047 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os09g04890.1 SDG30, ATX2,... Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Lfl_g35891 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Mp7g16780.1 SDG30, ATX2 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc09g098260.3.1 SDG30, ATX2,... Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g22080 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1463 1569
IPR000313 PWWP_dom 811 897
IPR003888 FYrich_N 957 1007
IPR003889 FYrich_C 1016 1092
No external refs found!