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  5. Als_g31913

Als_g31913 (DCL4, ATDCL4)


Aliases : DCL4, ATDCL4

Description : endoribonuclease (DCL4) of transacting siRNA pathway & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g31913

Target Alias Description ECC score Gene Family Method Actions
Cba_g01358 DCL1, CAF,... endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.03 OrthoFinder output from all 47 species
Nbi_g25122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32560 DCL4, ATDCL4 endoribonuclease (DCL2) of transacting siRNA pathway &... 0.03 OrthoFinder output from all 47 species
Sam_g09089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 1291 1402
IPR000999 RNase_III_dom 1086 1215
IPR006935 Helicase/UvrB_N 104 260
IPR003100 PAZ_dom 916 1042
IPR001650 Helicase_C 437 550
No external refs found!