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  5. Pnu_g13431

Pnu_g13431 (TIC40, ATTIC40, PDE120)


Aliases : TIC40, ATTIC40, PDE120

Description : component *(Tic40) of inner envelope TIC translocation system & original description: none


Gene families : OG0004334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13431
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00175860 TIC40, ATTIC40,... Protein translocation.chloroplast.inner envelope TIC... 0.04 OrthoFinder output from all 47 species
AT5G16620 TIC40, ATTIC40, PDE120 hydroxyproline-rich glycoprotein family protein 0.03 OrthoFinder output from all 47 species
Aev_g02390 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Dcu_g04022 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Len_g12504 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Mp3g00830.1 TIC40, ATTIC40, PDE120 component Tic40 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025125 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Spa_g08190 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Zm00001e008048_P001 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041243 STI1/HOP_DP 393 443
No external refs found!