Als_g30199 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g30199

Target Alias Description ECC score Gene Family Method Actions
Adi_g005725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101241 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13994 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g16833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g22600 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36355.t1 Aspi01Gene36355 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0012.g012931 No alias not classified & original description: CDS=1-3024 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044009 No alias not classified & original description: CDS=1-2178 0.02 OrthoFinder output from all 47 species
Azfi_s0242.g059832 No alias not classified & original description: CDS=1-2646 0.02 OrthoFinder output from all 47 species
Azfi_s0351.g066580 No alias not classified & original description: CDS=1-3804 0.04 OrthoFinder output from all 47 species
Azfi_s0371.g067098 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2013 0.02 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g07268 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g33015 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g77187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g35843 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47891 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g25114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63661 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g63849 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63869 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66518 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g22838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22860 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g25269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30634 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32250 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54364 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000612 No alias not classified & original description: CDS=302-3289 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000958 No alias not classified & original description: CDS=1-3216 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002236 No alias not classified & original description: CDS=1-2649 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006530 No alias not classified & original description: CDS=1-570 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008284 OTP84 not classified & original description: CDS=1-1746 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008527 OTP84 borate transporter *(BOR) & original description: CDS=118-8541 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013907 No alias not classified & original description: CDS=1-1875 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018468 No alias solute transporter *(MTCC) & original description: CDS=2675-4273 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018953 No alias not classified & original description: CDS=533-943 0.01 OrthoFinder output from all 47 species
Sam_g08388 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g25339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo123298 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo136241 EMB2758 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Tin_g04184 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g25388 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 86 116
IPR002885 Pentatricopeptide_repeat 431 451
IPR046848 E_motif 472 533
IPR002885 Pentatricopeptide_repeat 253 301
IPR002885 Pentatricopeptide_repeat 354 401
IPR002885 Pentatricopeptide_repeat 149 197
No external refs found!