Als_g29455

Description : component *(uS5) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g29455

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00212950	XW6,...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	OrthoFinder output from all 47 species
AT1G58380	XW6	Ribosomal protein S5 family protein	0.05	OrthoFinder output from all 47 species
Ceric.31G046200.1	Ceric.31G046200	component *(uS5) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Dde_g04227	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Mp5g15970.1	No alias	component RPS2 of SSU proteome	0.02	OrthoFinder output from all 47 species
Ore_g17004	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Pp3c20_18740V3.1	Pp3c20_18740	Ribosomal protein S5 family protein	0.03	OrthoFinder output from all 47 species
Pp3c24_5780V3.1	Pp3c24_5780	Ribosomal protein S5 family protein	0.01	OrthoFinder output from all 47 species
Solyc04g063290.3.1	Solyc04g063290	component RPS2 of SSU proteome	0.02	OrthoFinder output from all 47 species
Solyc04g074300.3.1	Solyc04g074300	component RPS2 of SSU proteome	0.02	OrthoFinder output from all 47 species
Spa_g13171	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Spa_g17385	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005324	Ribosomal_S5_C	54	126
IPR013810	Ribosomal_S5_N	2	34

External Links

No external refs found!

Als_g29455

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation