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  5. Pnu_g13245

Pnu_g13245


Description : not classified & original description: none


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00218970 evm_27.TU.AmTr_v1... FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G11610 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
Ala_g32706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G069500.1 Ceric.22G069500 not classified & original description: pacid=50615182... 0.02 OrthoFinder output from all 47 species
Gb_22114 QKY Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g23174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431772g0010 QKY Protein QUIRKY OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_80358g0010 No alias no description available(sp|q60ew9|ftip7_orysj : 423.0) 0.02 OrthoFinder output from all 47 species
Msp_g13983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004492 No alias not classified & original description: CDS=1-2934 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1547.g028074 No alias not classified & original description: CDS=1-3048 0.03 OrthoFinder output from all 47 species
Solyc03g077920.1.1 Solyc03g077920 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g07119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 786 941
IPR000008 C2_dom 377 481
IPR000008 C2_dom 536 641
IPR000008 C2_dom 7 101
IPR000008 C2_dom 221 324
No external refs found!