1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g29018

Als_g29018 (NIG)


Aliases : NIG

Description : not classified & original description: none


Gene families : OG0001644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001644_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g29018

Target Alias Description ECC score Gene Family Method Actions
Cba_g33563 NIG not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01941 NIG not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029915001 ZIGA4, AGD14 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_36063 ZIGA4, AGD14 class IV ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g11820.1 NIG, LOC_Os02g11820 Probable ADP-ribosylation factor GTPase-activating... 0.03 OrthoFinder output from all 47 species
Len_g29126 NIG not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02243 NIG not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g08756 NIG not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31099 NIG not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g006990.2.1 NIG, Solyc12g006990 Probable ADP-ribosylation factor GTPase-activating... 0.05 OrthoFinder output from all 47 species
Zm00001e014495_P002 NIG, Zm00001e014495 Probable ADP-ribosylation factor GTPase-activating... 0.03 OrthoFinder output from all 47 species
Zm00001e024971_P001 NIG, Zm00001e024971 Probable ADP-ribosylation factor GTPase-activating... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 13 123
No external refs found!