1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g28540

Als_g28540


Description : not classified & original description: none


Gene families : OG0005853 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005853_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g28540
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020943.85 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Dde_g26877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 498 603
IPR011545 DEAD/DEAH_box_helicase_dom 210 429
No external refs found!