Als_g28471 (SHP2, AGL5)


Aliases : SHP2, AGL5

Description : not classified & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g28471

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244880 AGL61, DIA,... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00198970 XAL1, AGL12,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AT1G22590 AGL87 AGAMOUS-like 87 0.03 OrthoFinder output from all 47 species
AT1G77980 AGL66 AGAMOUS-like 66 0.02 OrthoFinder output from all 47 species
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT3G30260 AGL79 AGAMOUS-like 79 0.02 OrthoFinder output from all 47 species
AT4G11880 AGL14 AGAMOUS-like 14 0.02 OrthoFinder output from all 47 species
AT4G37940 AGL21 AGAMOUS-like 21 0.03 OrthoFinder output from all 47 species
Aev_g04765 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08780 No alias MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49663 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11269 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17557 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g28162 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28879 AGL21 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37796 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16338 AGL13 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30277 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47147 AGL42 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61790 AGL6 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18204 AGL21 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06309.t1 Aspi01Gene06309 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19452.t1 AGL16, Aspi01Gene19452 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48068.t2 AGL30, Aspi01Gene48068 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48068.t3 AGL30, Aspi01Gene48068 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49755.t1 Aspi01Gene49755 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011751 No alias MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014288 No alias MADS/AGL-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0073.g037211 AGL104 MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0242.g059800 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g04967 AGL21 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07320 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09207 AGL13 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17331 AGL9, SEP3 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g25122 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29967 AGL16 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g47493 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G051800.1 GL19, AGL19,... MADS/AGL-type transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.38G021500.1 AGL2, SEP1,... MADS/AGL-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g31212 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g32867 AGL13 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08748 AGL9, SEP3 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10603 AGL42 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g50123 AGL3, SEP4 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g13869 AGL6 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012110001 AGL32, TT16, ABS RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01025945001 STK, AGL11 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01026207001 AGL32, TT16, ABS RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
LOC_Os01g10504.1 SHP2, AGL5,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45770.1 AGL6, LOC_Os02g45770 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os03g03070.1 GL19, AGL19,... MADS-box transcription factor 50 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os04g23910.1 AGL16, LOC_Os04g23910 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
LOC_Os05g34940.1 PI, LOC_Os05g34940 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
LOC_Os06g30830.1 AGL62, LOC_Os06g30830 transcription factor (MADS/AGL) 0.01 OrthoFinder output from all 47 species
LOC_Os12g21850.1 AGL61, DIA,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Len_g04127 AGL42 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09672 AGL104 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26280 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30679 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g32782 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41076 XAL1, AGL12 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_1767g0010 AGL66 transcription factor (MADS/AGL) 0.08 OrthoFinder output from all 47 species
MA_95674g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Msp_g04735 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11525 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13457 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g20675 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31321 AGL16 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09699 GL19, AGL19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28516 AGL66 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42896 AGL16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05105 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18075 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19814 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g64963 AGL6 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66755 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g29613 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g28715 AGL13 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g33044 AGL42 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g41504 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010711 No alias MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g15354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26111 No alias MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo437868 AGL29 RNA biosynthesis.transcriptional activation.MADS box... 0.08 OrthoFinder output from all 47 species
Solyc01g106710.1.1 AGL62, Solyc01g106710 component MED19 of head module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Spa_g04680 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09517 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14680 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16602 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09149 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20318 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g25479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003670_P002 AGL79, Zm00001e003670 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e036127_P002 AGL66, Zm00001e036127 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 95 158
No external refs found!