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  5. Pnu_g13077

Pnu_g13077


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g13077

Target Alias Description ECC score Gene Family Method Actions
Adi_g086090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31888.t1 Aspi01Gene31888 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021983001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g18214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_15917g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g14410.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g06177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 32 163
IPR002934 Polymerase_NTP_transf_dom 597 637
No external refs found!