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  5. Pnu_g12930

Pnu_g12930 (CYCT1;4)


Aliases : CYCT1;4

Description : regulatory component *(CYCT) of CTDK-I polymerase-II kinase complex & original description: none


Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12930

Target Alias Description ECC score Gene Family Method Actions
Adi_g022097 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Adi_g080715 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14083.t1 CYCT1;4, Aspi01Gene14083 regulatory protein *(CYCT) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Cba_g07639 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Cba_g28766 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.04 OrthoFinder output from all 47 species
Ceric.32G005000.1 CYCT1;4, Ceric.32G005000 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Cre10.g453050 No alias Cyclin-T1-4 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Cre14.g613900 CYCT1;4 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.01 OrthoFinder output from all 47 species
Dac_g07410 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Dac_g11973 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Dde_g07708 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.01 OrthoFinder output from all 47 species
Dde_g10347 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01013628001 CYCT1;4 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.03 OrthoFinder output from all 47 species
LOC_Os12g30020.2 CYCT1;4, LOC_Os12g30020 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species
Lfl_g05545 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Lfl_g11132 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
MA_8507811g0010 No alias cyclin (CYCT) 0.03 OrthoFinder output from all 47 species
Mp3g00720.1 CYCT1;4 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species
Msp_g02819 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ore_g10656 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Pir_g01978 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Pir_g05031 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Pir_g17325 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Pir_g58617 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Ppi_g02214 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Ppi_g06892 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g08960 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Solyc10g078180.3.1 Solyc10g078180 cyclin (CYCT). regulatory component of CTDK-I... 0.03 OrthoFinder output from all 47 species
Spa_g11581 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Spa_g50429 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Zm00001e033879_P003 CYCT1;4, Zm00001e033879 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 33 173
No external refs found!