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  5. Als_g23979

Als_g23979


Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0002813 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g23979

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00171720 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Adi_g018566 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Adi_g102347 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g02696 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g14240 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024933 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.01G055800.1 Ceric.01G055800 EC_2.1 transferase transferring one-carbon group &... 0.08 OrthoFinder output from all 47 species
Dcu_g04992 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
GSVIVT01019046001 No alias Chromatin organisation.histone modifications.histone... 0.1 OrthoFinder output from all 47 species
Gb_09467 No alias class V/Su(var) histone methyltransferase component of... 0.06 OrthoFinder output from all 47 species
LOC_Os02g47890.1 LOC_Os02g47890 Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os02g47900.1 LOC_Os02g47900 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Len_g13038 No alias EC_2.1 transferase transferring one-carbon group &... 0.1 OrthoFinder output from all 47 species
Lfl_g03507 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
MA_10427485g0010 No alias Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10428046g0010 No alias class V/Su(var) histone methyltransferase component of... 0.1 OrthoFinder output from all 47 species
MA_10428226g0010 No alias class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Mp7g11940.1 No alias class V/Su(var) histone methyltransferase component of... 0.06 OrthoFinder output from all 47 species
Msp_g24543 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ore_g28925 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020752 No alias EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Sam_g29232 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Solyc02g089970.3.1 Solyc02g089970 class V/Su(var) histone methyltransferase component of... 0.07 OrthoFinder output from all 47 species
Tin_g08153 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Zm00001e023341_P001 Zm00001e023341 class V/Su(var) histone methyltransferase component of... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 1253 1387
IPR040689 SUVR5_Znf-C2H2_3rpt 984 1031
IPR001214 SET_dom 1406 1524
No external refs found!