Als_g23945 (TGA2, AHBP-1B)

Aliases : TGA2, AHBP-1B

Description : TGA-type transcription factor & original description: none

Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g23945

Target	Alias	Description	ECC score	Gene Family Method
AT1G22070	TGA3	TGA1A-related gene 3	0.02	OrthoFinder output from all 47 species
AT3G12250	BZIP45, TGA6	TGACG motif-binding factor 6	0.04	OrthoFinder output from all 47 species
Azfi_s0005.g008907	TGA2, AHBP-1B	TGA-type transcription factor & original description: CDS=30-962	0.04	OrthoFinder output from all 47 species
LOC_Os06g15480.2	PAN, LOC_Os06g15480	transcription factor (bZIP). transcription factor (TGA)....	0.03	OrthoFinder output from all 47 species
LOC_Os07g48820.1	TGA2, AHBP-1B,...	transcription factor (bZIP). transcription factor (TGA)....	0.02	OrthoFinder output from all 47 species
LOC_Os08g07970.1	OBF4, TGA4,...	transcription factor (bZIP). transcription factor (TGA)	0.02	OrthoFinder output from all 47 species
MA_10431263g0010	TGA2, AHBP-1B	transcription factor (TGA)	0.03	OrthoFinder output from all 47 species
Smo404596	TGA2, AHBP-1B	RNA biosynthesis.transcriptional activation.bZIP...	0.04	OrthoFinder output from all 47 species
Solyc04g011670.3.1	TGA1, Solyc04g011670	transcription factor (bZIP). transcription factor (TGA)	0.06	OrthoFinder output from all 47 species
Solyc04g072460.3.1	TGA1, Solyc04g072460	transcription factor (bZIP). transcription factor (TGA)	0.04	OrthoFinder output from all 47 species
Zm00001e006810_P004	OBF4, TGA4,...	transcription factor (bZIP). transcription factor (TGA)	0.02	OrthoFinder output from all 47 species
Zm00001e019519_P001	TGA2, AHBP-1B,...	transcription factor (bZIP). transcription factor (TGA)....	0.03	OrthoFinder output from all 47 species
Zm00001e028691_P001	bZIP21, TGA9,...	transcription factor (bZIP). transcription factor (TGA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0030246	carbohydrate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	189	219
IPR025422	TGA_domain	281	356

External Links

No external refs found!

Als_g23945 (TGA2, AHBP-1B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation