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  5. Als_g23478

Als_g23478


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g23478

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00224090 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
AT5G42050 No alias DCD (Development and Cell Death) domain protein 0.03 OrthoFinder output from all 47 species
Adi_g007516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18482.t1 Aspi01Gene18482 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G074500.1 Ceric.16G074500 not classified & original description: pacid=50590002... 0.04 OrthoFinder output from all 47 species
Ceric.29G018900.1 Ceric.29G018900 not classified & original description: pacid=50624405... 0.02 OrthoFinder output from all 47 species
Dac_g37661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019563001 No alias B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
GSVIVT01037117001 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
LOC_Os01g36950.1 LOC_Os01g36950 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 252.0) 0.04 OrthoFinder output from all 47 species
LOC_Os05g51590.1 LOC_Os05g51590 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 248.0) 0.03 OrthoFinder output from all 47 species
Len_g20732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_74199g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 236.0) 0.03 OrthoFinder output from all 47 species
Msp_g08855 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g02251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15439 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g24417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g082610.4.1 Solyc08g082610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 303.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 288 414
No external refs found!