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  5. Als_g23352

Als_g23352


Description : stromal sorting factor of thylakoid membrane SRP insertion system *(STIC2) & original description: none


Gene families : OG0004403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g23352
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AT2G24020 No alias Uncharacterised BCR, YbaB family COG0718 0.04 OrthoFinder output from all 47 species
Aev_g04539 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Aop_g70924 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Ceric.35G009300.1 Ceric.35G009300 stromal sorting factor of thylakoid membrane SRP... 0.07 OrthoFinder output from all 47 species
Cre10.g458550 No alias Protein translocation.chloroplast.thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Dac_g01938 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Ehy_g10854 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Gb_22716 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Len_g22373 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Lfl_g00568 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Lfl_g33165 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Mp2g03740.1 No alias stromal sorting factor of thylakoid membrane SRP... 0.07 OrthoFinder output from all 47 species
Ore_g11337 No alias stromal sorting factor of thylakoid membrane SRP... 0.06 OrthoFinder output from all 47 species
Ppi_g00503 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Ppi_g04839 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Solyc08g006780.3.1 Solyc08g006780 stromal sorting factor of thylakoid membrane SRP... 0.08 OrthoFinder output from all 47 species
Spa_g06795 No alias stromal sorting factor of thylakoid membrane SRP... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR004401 YbaB/EbfC 86 171
No external refs found!