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  5. Pnu_g12634

Pnu_g12634


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12634
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00155660 evm_27.TU.AmTr_v1... CASP-like protein 2D1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Ala_g03811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029179001 No alias CASP-like protein 2C1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Ore_g28679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014965 No alias not classified & original description: CDS=570-1202 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 37 184
No external refs found!