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  5. Als_g22929

Als_g22929


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22929
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene29403.t1 Aspi01Gene29403 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67987.t1 ZFWD1, Aspi01Gene67987 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g72088 No alias regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Cba_g75051 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g12883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 212 248
IPR001680 WD40_repeat 176 208
IPR001680 WD40_repeat 41 77
No external refs found!