1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g21951

Als_g21951


Description : GARP subgroup HHO transcription factor & original description: none


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21951
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00241280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT2G03500 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g030747 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g15773 No alias GARP subgroup HHO transcription factor & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene06858.t1 Aspi01Gene06858 GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03915 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g18561 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02562 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo402040 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Spa_g55258 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g11367 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e003080_P001 Zm00001e003080 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 276 327
No external refs found!