1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g21530

Als_g21530 (ATHB3, HB-3, ATHB-3, HAT7)


Aliases : ATHB3, HB-3, ATHB-3, HAT7

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21530

Target Alias Description ECC score Gene Family Method Actions
AT1G26960 AtHB23, HB23 homeobox protein 23 0.02 OrthoFinder output from all 47 species
AT2G36610 ATHB22, HB22 homeobox protein 22 0.02 OrthoFinder output from all 47 species
Adi_g014406 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g21465 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Aev_g25617 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Cba_g13182 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Ehy_g03578 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01032491001 ATHB1, ATHB-1,... RNA biosynthesis.transcriptional activation.HB... 0.01 OrthoFinder output from all 47 species
Gb_39722 ATHB13 transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species
LOC_Os03g10210.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os08g32080.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os08g32085.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35910.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_19453g0050 ATHB1, ATHB-1,... Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g29472 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Pir_g40617 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc03g034130.4.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Spa_g11388 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g09467 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e010004_P002 ATHB16, HB16,... transcription factor (HD-ZIP I/II) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 73 112
IPR001356 Homeobox_dom 18 71
No external refs found!