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  5. Als_g21228

Als_g21228


Description : component *(eIF2B-delta) of eIF2B eIF2-GDP recycling complex & original description: none


Gene families : OG0004139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21228
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT2G44070 No alias NagB/RpiA/CoA transferase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ceric.03G085900.1 Ceric.03G085900 component *(eIF2B-delta) of eIF2B eIF2-GDP recycling... 0.03 OrthoFinder output from all 47 species
Len_g11053 No alias component *(eIF2B-delta) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Lfl_g02091 No alias component *(eIF2B-delta) of eIF2B eIF2-GDP recycling... 0.04 OrthoFinder output from all 47 species
Pir_g08802 No alias component *(eIF2B-delta) of eIF2B eIF2-GDP recycling... 0.03 OrthoFinder output from all 47 species
Ppi_g03186 No alias component *(eIF2B-delta) of eIF2B eIF2-GDP recycling... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0044237 cellular metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034227 tRNA thio-modification IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000649 IF-2B-related 401 693
No external refs found!