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  5. Als_g21187

Als_g21187 (IMPA-1, IMPA1,...)


Aliases : IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) & original description: none


Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21187

Target Alias Description ECC score Gene Family Method Actions
Adi_g015994 IMPA-2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112178 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Cba_g11822 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021721.27 IMPA-2 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
GSVIVT01028079001 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
GSVIVT01031205001 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
GSVIVT01035047001 IMPA-2 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Gb_35269 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species
LOC_Os01g14950.1 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species
LOC_Os05g06350.1 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.04 OrthoFinder output from all 47 species
Lfl_g05459 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Pir_g01366 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Pir_g10289 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Solyc01g060470.3.1 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.03 OrthoFinder output from all 47 species
Solyc01g100720.3.1 IMPA-4, Solyc01g100720 importin alpha adaptor proteins 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR032413 Arm_3 457 506
IPR002652 Importin-a_IBB 12 95
IPR000225 Armadillo 402 440
IPR000225 Armadillo 359 398
IPR000225 Armadillo 149 187
IPR000225 Armadillo 244 271
IPR000225 Armadillo 191 231
IPR000225 Armadillo 316 357
IPR000225 Armadillo 274 313
IPR000225 Armadillo 106 146
No external refs found!