Aliases : GRP2, ATGRP2, GR-RBP2
Description : RNA editing factor *(ORRM3) & original description: none
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00013p00256900 | GRP2, ATGRP2,... | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
AT2G37510 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G23830 | GR-RBP4, GRP4 | glycine-rich RNA-binding protein 4 | 0.07 | OrthoFinder output from all 47 species | |
Adi_g022268 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g068967 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g10875 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene18654.t1 | GR-RBP3, Aspi01Gene18654 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g08805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g10857 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g14006 | ATRZ-1A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g38953 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01021024001 | GRP2, ATGRP2, GR-RBP2 | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
Gb_40269 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.04 | OrthoFinder output from all 47 species | |
MA_10436424g0010 | ATRZ-1A | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
MA_77292g0010 | No alias | RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
Pir_g05753 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g10789 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pp3c4_6610V3.1 | GRP2, ATGRP2,... | glycine-rich RNA-binding protein 3 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g25482 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g38661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo140819 | GRP2, ATGRP2, GR-RBP2 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g06392 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g22222 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g04956 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e017933_P003 | CCR2, ATGRP7,... | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e028481_P002 | GRP2, ATGRP2,... | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 51 | 121 |
No external refs found! |