Als_g20640 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20640

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00100040 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.02 OrthoFinder output from all 47 species
Ala_g04792 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10320 ACOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17436 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27234 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45697.t1 OPCL1, Aspi01Gene45697 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25397 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29974 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01385 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010358001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031500001 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_21816 OPCL1 OPC-8:CoA synthetase 0.04 OrthoFinder output from all 47 species
LOC_Os01g67530.1 LOC_Os01g67530 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04000.1 OPCL1, LOC_Os03g04000 OPC-8:CoA synthetase 0.04 OrthoFinder output from all 47 species
Len_g14710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432138g0010 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10922g0010 OPCL1 OPC-8:CoA synthetase 0.04 OrthoFinder output from all 47 species
Mp1g04990.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13004 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g094520.2.1 OPCL1, Solyc12g094520 OPC-8:CoA synthetase 0.05 OrthoFinder output from all 47 species
Spa_g02284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12748 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e032697_P002 Zm00001e032697 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 46 454
IPR025110 AMP-bd_C 463 538
No external refs found!