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  5. Als_g20554

Als_g20554


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20554

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Als_g47747 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g38602 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42025.t1 HRS1, Aspi01Gene42025 GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene59741.t2 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59764.t2 Aspi01Gene59764 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g09039 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11944 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g14463 No alias transcription factor *(CLAUSA) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g36929 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g32380 KAN4, ATS not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06739 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23627 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_581253g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_937875g0010 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g37137 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g43178 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Solyc10g078720.2.1 Solyc10g078720 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e015547_P002 Zm00001e015547 Myb-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 18 68
IPR025756 Myb_CC_LHEQLE 100 146
No external refs found!