Als_g19876

Description : not classified & original description: none

Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g19876

Target	Alias	Description	ECC score	Gene Family Method
AT1G70190	No alias	Ribosomal protein L7/L12, oligomerisation;Ribosomal...	0.04	OrthoFinder output from all 47 species
AT2G03130	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.03	OrthoFinder output from all 47 species
AT3G06040	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.03	OrthoFinder output from all 47 species
AT4G36420	No alias	Ribosomal protein L12 family protein	0.04	OrthoFinder output from all 47 species
Aop_g01020	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g20522	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0004.g008259	No alias	not classified & original description: CDS=1-588	0.02	OrthoFinder output from all 47 species
Azfi_s0022.g016065	No alias	not classified & original description: CDS=1-390	0.04	OrthoFinder output from all 47 species
Azfi_s0331.g065406	No alias	not classified & original description: CDS=1-612	0.03	OrthoFinder output from all 47 species
Dac_g02148	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g05009	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g04371	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g03909	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g32424	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g00755	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014213	No alias	not classified & original description: CDS=1-594	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015697	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Sam_g25874	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sam_g25875	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Sam_g27095	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g092300.1.1	Solyc02g092300	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Spa_g09129	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Spa_g09130	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e032350_P001	Zm00001e032350	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000347	THO complex	IEP	HCCA
CC	GO:0000445	THO complex part of transcription export complex	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013823	Ribosomal_L7/L12_C	172	238
IPR008932	Ribosomal_L7/L12_oligo	104	148

External Links

No external refs found!

Als_g19876

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation