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  5. Als_g19286

Als_g19286


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g19286

Target Alias Description ECC score Gene Family Method Actions
Adi_g024716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07452 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g06550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29695 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67890 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G020600.1 Ceric.05G020600 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G091700.1 Ceric.11G091700 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G089400.1 Ceric.21G089400 not classified & original description: pacid=50603367... 0.05 OrthoFinder output from all 47 species
Ceric.31G051800.1 Ceric.31G051800 not classified & original description: pacid=50574746... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dac_g08463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48080 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04368 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g04370 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g10732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26505 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021475 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2172 0.02 OrthoFinder output from all 47 species
Sam_g16270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14175 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22163 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25854 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04732 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41079 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44241 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 528 574
IPR002885 Pentatricopeptide_repeat 196 240
IPR002885 Pentatricopeptide_repeat 295 342
IPR002885 Pentatricopeptide_repeat 412 458
IPR002885 Pentatricopeptide_repeat 269 291
IPR002885 Pentatricopeptide_repeat 647 677
IPR002885 Pentatricopeptide_repeat 783 810
No external refs found!