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  5. Als_g19131

Als_g19131 (emb2734)


Aliases : emb2734

Description : nucleocytoplasmic import karyopherin *(IMB3) & original description: none


Gene families : OG0001766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001766_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g19131
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AT5G19820 emb2734 ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g068548 emb2734 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G003600.1 emb2734, Ceric.17G003600 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G014000.1 emb2734, Ceric.26G014000 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Dde_g12801 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Gb_38404 emb2734 IMB3 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Len_g16328 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g03263 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Smo140234 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041653 Importin_rep_4 33 123
No external refs found!