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  5. Als_g18761

Als_g18761 (AtMYB20, MYB20)


Aliases : AtMYB20, MYB20

Description : MYB class-R2R3 subgroup-13 transcription factor & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18761
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00250970 ATMYB5, MYB5,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00146410 ATMYB5, MYB5,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00057800 MYB58, ATMYB58,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00037p00177500 ATMYB101,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00074250 AtMYB20, MYB20,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00079p00140660 BW62B, BW62C,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 OrthoFinder output from all 47 species
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.05 OrthoFinder output from all 47 species
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.03 OrthoFinder output from all 47 species
AT3G28470 ATMYB35, TDF1 Duplicated homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G46130 ATMYB48-1,... myb domain protein 48 0.03 OrthoFinder output from all 47 species
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 OrthoFinder output from all 47 species
AT5G59780 ATMYB59-1,... myb domain protein 59 0.03 OrthoFinder output from all 47 species
Adi_g021584 AtMYB20, MYB20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06971 AtMYB83, MYB83 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30134.t1 AtMYB17, MYB17,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G079300.1 AtMYB17, MYB17,... not classified & original description: pacid=50571720... 0.06 OrthoFinder output from all 47 species
Ceric.08G006600.1 AtMYB107,... not classified & original description: pacid=50638703... 0.04 OrthoFinder output from all 47 species
Dcu_g04758 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.04 OrthoFinder output from all 47 species
GSVIVT01004464001 MYB84, RAX3, ATMYB84 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01011417001 MYB30, ATMYB30 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01012447001 MYB33, ATMYB33 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01015102001 MYB3, ATMYB3 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
GSVIVT01016800001 MYB26, ATMYB26, MS35 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01027949001 MYB305, ATMYB71 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01031341001 ATMYB61, MYB61 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01032467001 MYB66, ATMYB66, WER, WER1 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
GSVIVT01032564001 ATMYB35, TDF1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01037667001 ATMYB101, MYB101, ATM1 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
LOC_Os01g03720.1 BW62B, BW62C,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g59660.1 MYB33, ATMYB33,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g51799.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os12g37970.1 ATMYB48-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Len_g57346 MYB3, ATMYB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432903g0010 ATMYB4, MYB4 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_230300g0010 ATMYB4, MYB4 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_29879g0010 ATMYB15, ATY19, MYB15 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
MA_64405g0010 MYB3, ATMYB3 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Mp4g21300.1 AtMYB40, MYB40 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g44338 MYB3, ATMYB3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22220 AtMYB20, MYB20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27829 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Nbi_g30785 MYB3, ATMYB3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15609 ATMYB46, MYB46 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14641 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.05 OrthoFinder output from all 47 species
Solyc03g121740.3.1 MYB26, ATMYB26,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Spa_g07339 MYB121, ATMYB121 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10427 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002919_P001 ATMYB59-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e004114_P001 MYBCOV1, MYB96,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e020963_P001 ATMYB59-1,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e026464_P001 Zm00001e026464 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e027531_P001 ATMYB61, MYB61,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e028201_P001 MYB37, RAX1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e039235_P001 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 110
IPR001005 SANT/Myb 14 61
No external refs found!