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  5. Als_g18518

Als_g18518


Description : not classified & original description: none


Gene families : OG0013233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g18518

Target Alias Description ECC score Gene Family Method Actions
Aop_g29338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G022000.1 Ceric.24G022000 not classified & original description: pacid=50628904... 0.05 OrthoFinder output from all 47 species
Dac_g28523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15800 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 280 327
IPR002885 Pentatricopeptide_repeat 382 430
IPR002885 Pentatricopeptide_repeat 483 529
IPR002885 Pentatricopeptide_repeat 79 126
IPR002885 Pentatricopeptide_repeat 356 380
IPR002885 Pentatricopeptide_repeat 586 615
IPR002885 Pentatricopeptide_repeat 556 582
IPR002885 Pentatricopeptide_repeat 153 177
IPR002885 Pentatricopeptide_repeat 687 714
IPR002885 Pentatricopeptide_repeat 862 884
IPR002885 Pentatricopeptide_repeat 182 212
IPR002885 Pentatricopeptide_repeat 786 823
No external refs found!