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  5. Als_g16581

Als_g16581


Description : plant-specific component *(TRIPP) of TRAPP-II Golgi membrane trafficking complex & original description: none


Gene families : OG0006244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006244_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16581

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene65948.t1 Aspi01Gene65948 plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.04 OrthoFinder output from all 47 species
Ehy_g23180 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.03 OrthoFinder output from all 47 species
Mp3g24570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g52295 No alias plant-specific component *(TRIPP) of TRAPP-II Golgi... 0.04 OrthoFinder output from all 47 species
Zm00001e039644_P001 Zm00001e039644 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!