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  5. Als_g16321

Als_g16321


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16321

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00073920 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Aspi01Gene40930.t1 Aspi01Gene40930 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54964.t1 Aspi01Gene54964 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001675001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01035215001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.01 OrthoFinder output from all 47 species
Lfl_g05030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g08372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g081250.3.1 Solyc02g081250 Pentatricopeptide repeat-containing protein At1g06710,... 0.02 OrthoFinder output from all 47 species
Zm00001e007456_P003 PRAF1, Zm00001e007456 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e015467_P001 Zm00001e015467 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e018599_P001 Zm00001e018599 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 325 373
IPR000408 Reg_chr_condens 600 647
IPR000408 Reg_chr_condens 376 427
IPR000408 Reg_chr_condens 546 595
IPR000408 Reg_chr_condens 431 479
IPR000408 Reg_chr_condens 494 543
IPR027988 BRX_N 916 949
IPR001849 PH_domain 13 122
IPR013591 Brevis_radix_dom 1117 1172
IPR000306 Znf_FYVE 651 717
No external refs found!