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  5. Als_g16203

Als_g16203 (WAVE4, ITB1, SCAR2,...)


Aliases : WAVE4, ITB1, SCAR2, ATSCAR2, DIS3

Description : component *(SCAR) of SCAR/WAVE ARP2/3-activating complex & original description: none


Gene families : OG0001552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001552_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16203

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00061660 WAVE4, ITB1,... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
AT2G38440 WAVE4, ITB1,... SCAR homolog 2 0.06 OrthoFinder output from all 47 species
Adi_g128173 ATSCAR4, WAVE3, SCAR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06189 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01030246001 WAVE4, ITB1,... Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
Solyc02g076840.3.1 WAVE1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.02 OrthoFinder output from all 47 species
Solyc09g014980.4.1 WAVE4, ITB1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!