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  5. Als_g16175

Als_g16175


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16175
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00090250 evm_27.TU.AmTr_v1... CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g010184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_189315g0010 No alias CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 415 498
IPR000644 CBS_dom 126 171
IPR000644 CBS_dom 294 336
IPR000644 CBS_dom 234 281
IPR000644 CBS_dom 66 112
No external refs found!