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Pnu_g11917 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11917

Target Alias Description ECC score Gene Family Method Actions
Als_g37006 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05100 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_959704g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g29536 No alias CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41818 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Solyc04g056270.4.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002909 IPT_dom 516 601
IPR002110 Ankyrin_rpt 729 820
IPR005559 CG-1_dom 30 143
IPR000048 IQ_motif_EF-hand-BS 962 981
IPR000048 IQ_motif_EF-hand-BS 1036 1056
IPR000048 IQ_motif_EF-hand-BS 939 957
No external refs found!