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  5. Pnu_g11885

Pnu_g11885 (ATTIP1.3, TIP1;3, GAMMA-TIP3)


Aliases : ATTIP1.3, TIP1;3, GAMMA-TIP3

Description : tonoplast intrinsic protein *(TIP) & original description: none


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11885

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00231200 TMP-C, PIP1;4,... Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
AMTR_s00102p00061000 GAMMA-TIP,... Solute transport.channels.MIP family.tonoplast intrinsic... 0.03 OrthoFinder output from all 47 species
AMTR_s00152p00041700 PIP3, SIMIP,... Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
Als_g13692 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26338 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31172 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Cba_g01655 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G073700.1 PIP3B, PIP2;8,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g22217 ATTIP2;1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g64330.1 PIP2D, PIP2;5,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species
Len_g03166 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Len_g32270 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10177437g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.01 OrthoFinder output from all 47 species
Mp4g04440.1 PIP3, SIMIP,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Mp6g11730.1 ATTIP2;1,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Ore_g34490 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Pir_g32460 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Pir_g43901 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 47 species
Ppi_g28106 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g47805 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002971 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Solyc01g094690.4.1 PIP1;5, PIP1D,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Solyc08g081190.3.1 PIP1C, TMP-B,... plasma membrane intrinsic protein (PIP) 0.01 OrthoFinder output from all 47 species
Solyc11g069430.2.1 PIP2B, PIP2;2,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Tin_g24068 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e015330_P001 DELTA-TIP3,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Zm00001e015367_P001 PIP1;5, PIP1D,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Zm00001e016388_P002 TIP4;1, Zm00001e016388 tonoplast intrinsic protein (TIP) 0.01 OrthoFinder output from all 47 species
Zm00001e041529_P001 DELTA-TIP2,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000425 MIP 14 235
No external refs found!