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  5. Als_g15671

Als_g15671


Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15671

Target Alias Description ECC score Gene Family Method Actions
AT3G46580 MBD05, MBD5, ATMBD5 methyl-CPG-binding domain protein 5 0.02 OrthoFinder output from all 47 species
Aob_g26984 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44730.t1 Aspi01Gene44730 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10163 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17083 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18783 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04569 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09837 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13428 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16308 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17409 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09180 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002716 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=802-2949 0.03 OrthoFinder output from all 47 species
Sam_g19245 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26548 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080690.4.1 Solyc08g080690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g04676 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040664_P001 Zm00001e040664 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 340 397
No external refs found!