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  5. Als_g15588

Als_g15588 (BUM1, SHL, STM, WAM, WAM1, BUM)


Aliases : BUM1, SHL, STM, WAM, WAM1, BUM

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15588
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00162850 KNAT3,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00169620 KNAT6, KNAT6L,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00165180 KNAT6, KNAT6L,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT1G62360 BUM1, SHL, STM,... KNOX/ELK homeobox transcription factor 0.03 OrthoFinder output from all 47 species
AT1G70510 KNAT2, ATK1 KNOTTED-like from Arabidopsis thaliana 2 0.02 OrthoFinder output from all 47 species
Aob_g22220 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56442.t2 KNAT3, Aspi01Gene56442 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000431 KNAT7, IXR11 KNOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016023 KNAT6, KNAT6L, KNAT6S not classified & original description: CDS=247-1020 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030818 KNAT3 KNOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0350.g066569 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=1-1488 0.05 OrthoFinder output from all 47 species
Azfi_s0574.g078063 KNAT3 KNOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0637.g080498 KNAT4 KNOX-type transcription factor & original description: CDS=1-810 0.05 OrthoFinder output from all 47 species
Ceric.20G046300.1 BUM1, SHL, STM,... KNOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g01546 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03334 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11389 KNAT3 KNOX-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g48747 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009273001 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
GSVIVT01013790001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01030488001 BUM1, SHL, STM,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01031241001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01035921001 KNAT3 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19694.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
LOC_Os02g08544.1 KNAT3, LOC_Os02g08544 transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g47016.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g51690.2 BP, BP1, KNAT1,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
LOC_Os03g51710.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os05g03884.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Lfl_g06541 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30292 KNAT6, KNAT6L, KNAT6S not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30454 KNAT4 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44272 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05715 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25497 KNAT4 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35975 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36039 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62008 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02102 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06826 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18663 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c18_18750V3.1 Pp3c18_18750 KNOTTED1-like homeobox gene 6 0.03 OrthoFinder output from all 47 species
Pp3c19_5610V3.1 Pp3c19_5610 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c21_10320V3.1 BUM1, SHL, STM,... KNOTTED-like from Arabidopsis thaliana 2 0.01 OrthoFinder output from all 47 species
Pp3c6_1550V3.1 KNAT4, Pp3c6_1550 KNOTTED1-like homeobox gene 3 0.02 OrthoFinder output from all 47 species
Ppi_g10499 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005308 BUM1, SHL, STM,... KNOX-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007633 KNAT7, IXR11 not classified & original description: CDS=1-1266 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019793 KNAT4 KNOX-type transcription factor & original description: CDS=1-1188 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020964 BUM1, SHL, STM,... KNOX-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022803 No alias not classified & original description: CDS=20-451 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026749 KNAT3 not classified & original description: CDS=1-780 0.03 OrthoFinder output from all 47 species
Sam_g01264 No alias KNOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g36645 No alias KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo159366 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Solyc01g100510.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Solyc02g081120.4.1 BUM1, SHL, STM,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Solyc05g005090.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Spa_g22911 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005170_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e005545_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e005547_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e011538_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.06 OrthoFinder output from all 47 species
Zm00001e017489_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.05 OrthoFinder output from all 47 species
Zm00001e027562_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.07 OrthoFinder output from all 47 species
Zm00001e032761_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e039044_P001 KNAT7, IXR11,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 323 362
IPR005540 KNOX1 140 180
IPR005541 KNOX2 191 236
No external refs found!