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  5. Als_g15358

Als_g15358


Description : RAB5 canonical effector *(EREX) & original description: none


Gene families : OG0002176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15358
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
Adi_g019672 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16621 No alias RAB5 canonical effector *(EREX) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27152 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0034.g025370 No alias RAB5 canonical effector *(EREX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.03G023200.1 Ceric.03G023200 RAB5 canonical effector *(EREX) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G069700.1 Ceric.23G069700 RAB5 canonical effector *(EREX) & original description:... 0.03 OrthoFinder output from all 47 species
Cre11.g467681 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01035873001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
LOC_Os06g43560.1 LOC_Os06g43560 canonical RAB5 effector (EREX) 0.03 OrthoFinder output from all 47 species
Lfl_g04197 No alias RAB5 canonical effector *(EREX) & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g01046 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12265 No alias RAB5 canonical effector *(EREX) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03469 No alias RAB5 canonical effector *(EREX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030469_P004 Zm00001e030469 canonical RAB5 effector (EREX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 91 165
No external refs found!