1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g15321

Als_g15321


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15321
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Aob_g33309 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g09378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022141 No alias not classified & original description: CDS=662-3931 0.02 OrthoFinder output from all 47 species
Spa_g37184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08448 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023246_P001 Zm00001e023246 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 661 720
IPR001849 PH_domain 15 123
IPR013591 Brevis_radix_dom 1057 1112
IPR000408 Reg_chr_condens 381 431
IPR000408 Reg_chr_condens 550 599
IPR000408 Reg_chr_condens 435 483
IPR000408 Reg_chr_condens 604 651
IPR000408 Reg_chr_condens 329 377
IPR000408 Reg_chr_condens 498 547
IPR027988 BRX_N 920 947
No external refs found!