Als_g15002 (STI)


Aliases : STI

Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15002

Target Alias Description ECC score Gene Family Method Actions
AT4G24790 No alias AAA-type ATPase family protein 0.06 OrthoFinder output from all 47 species
Aev_g39960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64618.t1 STI, Aspi01Gene64618 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12833 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G081700.1 STI, Ceric.18G081700 not classified & original description: pacid=50622228... 0.06 OrthoFinder output from all 47 species
GSVIVT01007580001 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01023130001 STI Protein STICHEL OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_06112 STI Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g45340.1 LOC_Os05g45340 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g02670.1 LOC_Os08g02670 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g19180.1 LOC_Os12g19180 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g05036 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g13040.1 STI Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g07626 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11006 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61848 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g40290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g102810.3.1 STI, Solyc01g102810 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g37925 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e007784_P001 Zm00001e007784 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019639_P005 STI, Zm00001e019639 Protein STICHEL OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032180_P001 Zm00001e032180 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039775_P001 STI, Zm00001e039775 Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 676 798
No external refs found!