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  5. Als_g14084

Als_g14084


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14084

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00250890 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00104p00026540 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.03 OrthoFinder output from all 47 species
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G14650 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g112354 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32139 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28456 No alias EC_3.2 glycosylase & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g70636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13416.t1 Aspi01Gene13416 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0030.g024436 No alias EC_3.2 glycosylase & original description: CDS=1-1320 0.03 OrthoFinder output from all 47 species
Azfi_s0157.g053776 No alias EC_3.2 glycosylase & original description: CDS=175-1677 0.03 OrthoFinder output from all 47 species
Ceric.38G004300.1 Ceric.38G004300 EC_3.2 glycosylase & original description:... 0.1 OrthoFinder output from all 47 species
Dcu_g37611 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.02 OrthoFinder output from all 47 species
GSVIVT01013772001 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017305001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028132001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031298001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032447001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033303001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01033362001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01033364001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
Gb_07779 No alias Polygalacturonase OS=Actinidia deliciosa... 0.05 OrthoFinder output from all 47 species
LOC_Os08g23790.1 LOC_Os08g23790 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.03 OrthoFinder output from all 47 species
LOC_Os11g14400.1 LOC_Os11g14400 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Lfl_g19271 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
MA_13282g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
MA_285723g0010 No alias Polygalacturonase OS=Persea americana... 0.03 OrthoFinder output from all 47 species
MA_754919g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
Mp3g10720.1 No alias Polygalacturonase OS=Chamaecyparis obtusa... 0.02 OrthoFinder output from all 47 species
Mp3g21140.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Nbi_g06863 No alias EC_3.2 glycosylase & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g42249 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24091 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03112 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002755 No alias not classified & original description: CDS=1-783 0.03 OrthoFinder output from all 47 species
Smo78038 No alias Cell wall.pectin.modification and... 0.04 OrthoFinder output from all 47 species
Solyc07g041650.3.1 Solyc07g041650 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.04 OrthoFinder output from all 47 species
Solyc08g014560.3.1 Solyc08g014560 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Solyc10g047570.2.1 Solyc10g047570 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 OrthoFinder output from all 47 species
Solyc10g047590.3.1 Solyc10g047590 Polygalacturonase OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Spa_g30681 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54713 No alias polygalacturonase *(PGX1-like) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006091_P001 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.03 OrthoFinder output from all 47 species
Zm00001e027720_P001 Zm00001e027720 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032294_P001 Zm00001e032294 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 1 145
No external refs found!