1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g14000

Als_g14000


Description : not classified & original description: none


Gene families : OG0002693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00221370 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aop_g14213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0198.g057435 No alias not classified & original description: CDS=75-2141 0.06 OrthoFinder output from all 47 species
Ceric.22G007400.1 Ceric.22G007400 not classified & original description: pacid=50614788... 0.04 OrthoFinder output from all 47 species
Dcu_g42083 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g40347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01037687001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_09331 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g50320.1 LOC_Os01g50320 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g08834 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g26427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g35592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05722 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53864 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04625 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g39052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028122_P004 Zm00001e028122 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000061 Surp 21 68
No external refs found!